Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYQKIYTHKVVFSSLFFLLFLFNVETLLFSHFSDDFSQLFFLFENHVYDFIIKLDYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSSIALYVFYFALLGTLLWRFLGASMKQSFLPSMNICVVWVFASSLQSFRFLSVSDCVDFSLFILALFLLILVLIYHKRLFGLYEYANTLILIVGLCVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYIHNTLRRLEHKI |
| 2LOT Chain:A ((43-59)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGNGLVLWTVFRKKGHHHHHH---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7399 for 55 contacts (-134.5/contact) +
2D Compatibility (PS) -1655 + (NN) -1234 + (LL) 20252
1D Compatibility (HY) 400 + (ID) 100
Total energy: 10264.0 ( 186.62 by residue)
QMean score : 0.634
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