Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNTQGHACGLDELDALEILGYVPKDSLEKANFYAPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE
2RBD Chain:A ((34-62))
----------------------------------------------------------------------------------------------------------------------NGYRSFINHTGDEDLKNLIDEAIQAMQDENHQLEE
General information:
TITO was launched using:
RESULT:
Template:
2RBD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9839 for 134 contacts (-73.4/contact) +
2D Compatibility (PS) -3297 + (NN) -3466 + (LL) 10032
1D Compatibility (HY) -800 + (ID) 250
Total energy: -7620.0 ( -56.87 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_2RBD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RBD-query.scw
PDB file :
Tito_Scwrl_2RBD.pdb
: