Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLNNKHREKGLKAEEEACGFLKTLGFEMIERNFFSQFGE---IDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
4TKK Chain:A ((9-63))
------------SAVERNIVSRLRDKGFAVVRAPA-----KDPIPDIIALKNGVIILIEMKSRKDIEGKIYVRREQAEGIIEFARKSGGSLFLGVKKPGVLKFIPFEKLRRTETGNY
General information:
TITO was launched using:
RESULT:
Template:
4TKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20973 for 236 contacts (-88.9/contact) +
2D Compatibility (PS) -4889 + (NN) 107 + (LL) 844
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -29311.0 ( -124.20 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4TKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TKK-query.scw
PDB file :
Tito_Scwrl_4TKK.pdb
: