Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAEFIDLVKKAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
1B8Z Chain:A ((1-89))
MNKKELIDRVAKK-AGAKKKDVKLILDTILETITEALAKGEKVQIVGFGSFEV-----------------------VPKFKPGKALKEKVK---
General information:
TITO was launched using:
RESULT:
Template:
1B8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3601 for 354 contacts (10.2/contact) +
2D Compatibility (PS) -7098 + (NN) -948 + (LL) 476
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -10819.0 ( -30.56 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1B8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B8Z-query.scw
PDB file :
Tito_Scwrl_1B8Z.pdb
: