Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNHQNMLDNQTILITGGTGSFGKRFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEISQVIALSTDKAANPINLYGATKLCSDKLFVS-ANNFKGPSQTQFGVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMIDLAKAL-----APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFE-YSSHTNNQWLEPDDLLKLL |
| 4J2O Chain:A ((23-344)) | ---------DKVLLITGGTGSFGNAVLKRFLET-DIKEIRIFSRDEKKQDDMRKKYHSAKLKFYIGDVRDYNSILNATRGVDYIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIQNHVKRVVCLSTDKAVYPINAMGISKAMMEKVMVAKSRNLEGLDTVICG-TRYGNVMASRGSVIPLFVDQIR-QGKPLTITDPNMTRFMMTLEDAVDLVLYAFEHGENGDIFVQKAPAATIAVLAEALKQLLNVEDHPISIMGTRHGEKAFEALLSREEMVHAFDQGDYFRVPA-----DQ--------------------DYNSH-NTTRLDVEGMKQLL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -171479 for 2428 contacts (-70.6/contact) +
2D Compatibility (PS) -31704 + (NN) -11837 + (LL) 2256
1D Compatibility (HY) -23600 + (ID) 6050
Total energy: -242414.0 ( -99.84 by residue)
QMean score : 0.482
|
|
|