Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDANCLKLMFVAGSQDFYHIKGDRTNALLDTLELALQSKITAFQFRQKGDLALQDPVEIKRLALECQKLCKKYGTPFIINDEVRLALELKADGVHVGQEDMAIEEVVTLCQKRLFIGLSVNTLEQALKARHLDHIAYLGVGPIFPTPSKKDAKEVVGVNLLKKIHDSGVEKPLIAIGGITTDNASKLQKFS--GIAVISAITQAKDKALAVEKLLKNA
1G6C Chain:A ((18-216))
------LSVYFIMGSNN---TKAD----PVTVVQKALKGGATLYQFREKGGDALTGEARIK-FAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGD-MILGVAAHTMSEVKQAEE-DGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI
General information:
TITO was launched using:
RESULT:
Template:
1G6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150119 for 1650 contacts (-91.0/contact) +
2D Compatibility (PS) -21596 + (NN) -16159 + (LL) 1244
1D Compatibility (HY) -12000 + (ID) 4050
Total energy: -202680.0 ( -122.84 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_1G6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6C-query.scw
PDB file :
Tito_Scwrl_1G6C.pdb
: