Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSPVNPIHTNANALNSGAKNEVKDAKNAPKSASKDFSKILNQKISKDKTAPKESPNHSALKATPKDAKEDAKALEKTPTLPHQHAQNLAKDQQAPTLKDWLNHPKTHPTAPHEAQHETHEANETNPKTPNETLSKNEKKPNEVASNAHQTNLPNKNPITPNHANNAIKNPTTPTHNVKDPKTLKDIQTLSQKHDLNASNIQAATTPENKNPLNASDHLALKTTQASINHTLTKNDAKNTANLSSVLQSLEKKEPQNKEHANPPNNEKKTPPLKEALQMNAIKRDKTLSKKKPEKTPIHAKTQTIAPSATPENAPKIPLKTLPLMPLIGANPPPNDNAPTPLEKEEKTKEISDNKEKAKETNSSAQSVQNTQASDKTSDNKSTTPKETIRHFTQQLKQEIQEYKPPMSKISMDLFPKELGKVEVTIQKVGKNLKVSVISHNNSLQTFLDNQQDLKNSLNALGFEGVDLSFSQDSSKEQQAPKDQPKEPFKEQELTPLKENALKSYQENTDHENQETSMQITLYA |
4A0B Chain:B ((222-335)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTK----LLTTDQRNEIRVYSSYDWSKPDQIIIH-------PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRE------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 77065 for 739 contacts (104.3/contact) +
2D Compatibility (PS) -11682 + (NN) -1489 + (LL) 16168
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: 74162.0 ( 100.35 by residue)
QMean score : 0.139
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