Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPM---ETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVESVIFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQKPQTPPKETA |
| 3UPB Chain:A ((248-336)) | --------TIVMGASFRNVEQVIALAGCDALTISPVLLEELKNRDEHLEVKLT----------QISEADF----RWLMNE--NAMATHKLA-EGIRLFT---KDTIELENIIKQNL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 26301 for 350 contacts (75.1/contact) +
2D Compatibility (PS) -8064 + (NN) 777 + (LL) 15876
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: 29240.0 ( 83.54 by residue)
QMean score : 0.245
|
|
|