Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRAL----KGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLNDIEAKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
1BD0 Chain:A ((4-368)) | -FHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASAL-YSGPFPIHFHLKMDTGMGRLGV----KDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRP---PLVHCANSAASLRF----PDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRL-QHFHVLVDGQKAPIVGRICMDQCMIRLPG-PLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIFF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -218752 for 3065 contacts (-71.4/contact) +
2D Compatibility (PS) -38238 + (NN) -3499 + (LL) 696
1D Compatibility (HY) -27600 + (ID) 6400
Total energy: -293793.0 ( -95.85 by residue)
QMean score : 0.551
|
|
|