Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEIKTLLVDFFPQAKHFGIILIKAIVVFCIGFYFSFFLRNKTMKLLSK--------KDEILANFVAQVTFILILIITTIIALSTLGVQTTSIITVLGTVGIAVALALKDYLSSIAGGIILIILHPFKKGDIIEISGLEGKVEALNFFNTSLRLHDGRLAVLPNRSVAN-SNIINSNNTACRRIEWVCG-------VGYGSDIELVHKTIKDVIDGMEKIDKNMPTFIGITDFGQSSLNFTIRVWAKIED-GIFNVRSELIERIKNALDANRIEIPFNKLDISINKQDSSK |
| 3UDC Chain:A ((16-279)) | -------------KAVKFLLDVLKILIIAFIGIKFADFLIYRFYKLYSKSKIQLPQRKIDTLTSLTKNAVRYIIYFLAGASILKLFNIDMTSLLAVAGIGSLAIGFGAQNLVKDMISGFFIIFEDQFSVGDYVTINGISGTVEEIGLRVTKIRGFSDGLHIIPNGEIKMVTNLTKDSMMAVVNIAFPIDEDVDKIIEGLQEICEEVKKSRDDLIEG--------PTVLGITDMQDSKL--VIMVYAKTQPMQKWAVERDIRYRVKKMFDQKNISFPYPQMDVNFKRV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104747 for 1510 contacts (-69.4/contact) +
2D Compatibility (PS) -25375 + (NN) -3661 + (LL) 1828
1D Compatibility (HY) -23600 + (ID) 3250
Total energy: -158805.0 ( -105.17 by residue)
QMean score : 0.281
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