Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHSNEVSW----REGLCEVVRIPLNEHGLLDLEILEQTLKKTPNS-LVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAHANPKDCEYQTGFYA--PHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYGNLTASRVGVVAFNIGGISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 4LW4 Chain:A ((114-402)) | ----------------------------------------------------------------------------------------------------------------------------------------EIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELI--TPRSRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPT-GIGVLYGKSELLEAMSP--WLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPGFRSFRCQDSS---LLAFDFAGVHHSDMVTLLA-EYGIALRAGQHCAQPLLAEL------------GVTGTLRASFAPYNTKSDVDALVNAVDRALELLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172372 for 2186 contacts (-78.9/contact) +
2D Compatibility (PS) -30289 + (NN) -12354 + (LL) 10264
1D Compatibility (HY) -12800 + (ID) 3800
Total energy: -221351.0 ( -101.26 by residue)
QMean score : 0.367
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