Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHILVSGATSGFGLEIAKAFLQKNHVVFGTGRRQENLQKLQ---LAYPKRFIPLCFDLQNKPETKRAIETIFSMTDRIDALINNAGLALGLNKAYECELDDWEVMIDTNIKGLLHLTRLILPSMIEHDQGTIINLGSIAGTYAYPGGNVYGASKAFVKQFSLNLRADLAGTNIRVSNVEPGLCGETEFSMVRFKGDKIKAQSVYENTLY----LKPQDIANIVLWIYEQPSHVNINRIEIMPTSQTFAPLPTHKNP |
| 2JAP Chain:A ((11-246)) | ----LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTT-DTEL---RGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPHHATVHEIFIRPTDQV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109103 for 1966 contacts (-55.5/contact) +
2D Compatibility (PS) -24537 + (NN) -7860 + (LL) 976
1D Compatibility (HY) -10800 + (ID) 3850
Total energy: -155174.0 ( -78.93 by residue)
QMean score : 0.432
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