Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLKKSLCALLISGFFIPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQALMFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRW-WNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGG---------QLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQWPNGYPYFSQKDNPQGGEIGKYSNPTILDRVYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYLYKNKWLSVRADAFFSFVGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK |
| 3WL6 Chain:A ((122-213)) | --------------------------------------------------------------------------------------------------------------------------------------------------------NGWNWNPWFEGRAADPSGEHWKNDEGPDSSFFVAMVQCVGTKYKLDARRLFLGGISSGGTMTNRALLFR---SNFWAGGLPISGEWYVTSDDGTPLSFDDARAAVAAAPTKIHQGRVGPYPLPAKVGPLIVMTVWGGEKDLWNCTRPDGSRFLCADYRPSTQAGSNFFSAQPDVVHVACSSTHGHMWPQLNTQEFNRWALDTLASHPKGSDPRSFKLTQPPEGYTCHVGPFTGLYASA------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WL6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3697 for 476 contacts (7.8/contact) +
2D Compatibility (PS) -8799 + (NN) -5671 + (LL) 12380
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -4843.0 ( -10.17 by residue)
QMean score : -0.043
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