Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGIMYENGRGVPKDYKKAVEYFQKA--VDNDIPRGYNNLG-VMYKEGKGVPKDEKKAVEYFRIATEKGYTN--AYINLGIMYMEGRGVPSNYAKATECFRKAMH--KGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNTSSR |
1NA0 Chain:A ((24-119)) | --------------------------------------------------------------------------------DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-----DYDEAIEYYQKALELDPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27461 for 622 contacts (-44.1/contact) +
2D Compatibility (PS) -10038 + (NN) -6842 + (LL) 9332
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -41659.0 ( -66.98 by residue)
QMean score : 0.401
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