Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDQLQIVPKAQVLKNNTMERSLALALQKVSIPRSTSAHRTLLINHFLEQVILQNIKTIAFRGIIKLTPHNENPLLKPYSAFITLNSIIRACAYCPL
3BPJ Chain:A ((5-46))
-IDAMNPSSRDDFTEF---GKLLKDKIT----QYEKSLYYASFLEVLVRDVCISLEIDDLKKITNSLTVLCSEKQKQ--------------------
General information:
TITO was launched using:
RESULT:
Template:
3BPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1486 for 181 contacts (-8.2/contact) +
2D Compatibility (PS) -4501 + (NN) -3902 + (LL) 2764
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -8925.0 ( -49.31 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3BPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BPJ-query.scw
PDB file :
Tito_Scwrl_3BPJ.pdb
: