Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKK--VLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGE-LFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCKE--NEKTLVIGGGNSAVEYAIALCKTTP-TTLNYRKKEFSRINEDNAKNLQE----VLDNNTLKSKLGVD------IESLEEDNTQIKVNFTDNTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 3LZX Chain:A ((4-286)) | -DTKVYDITIIGGGPVGLFTAF---YGGMRQASVKIIESLPQLGGQLSALYP---------EKYIYDVAG---FPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF-RAHEHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEIL---------EIDDLIVNYGFVSSLGPIKNWGLDIE--KNSIVVKSTMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -118279 for 2067 contacts (-57.2/contact) +
2D Compatibility (PS) -27728 + (NN) -833 + (LL) 916
1D Compatibility (HY) -17200 + (ID) 3550
Total energy: -166674.0 ( -80.64 by residue)
QMean score : 0.397
|
|
|