Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFYDWIKEFVRDQGEFIAQQSGWLELERSSYAKLIAQTISHVLNGGSLLVSADSSRRWFLNYILSNLNPKDLKERPLLSVIDFNASSFYPKNDANLSLATIELTYQNPMFWHVGRVENEGLKTLLLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLLQLFKLFENALFSALYNKVAL |
2O8C Chain:A ((26-98)) | -------------------------------------------------------------------------MPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMN-----FESFVKDLLLVRQYRVEVYKNRAGSKENDWYLAYKASPGNLSQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2O8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4999 for 456 contacts (-11.0/contact) +
2D Compatibility (PS) -7672 + (NN) -2428 + (LL) 5712
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -15537.0 ( -34.07 by residue)
QMean score : 0.200
|
|
|