Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRFDLRPLKAD-IFERLEELIEKEMQPNEVAIFMFEVGDFSNIPKSAEFIQSKGHELLNSLRFNQADWTIVVRKKA
1JE3 Chain:A ((28-97))
-YRLDMVGEPCPYPAVATLEAMP-QLKKGEILEVVS--DCPQSINNIPLDARNHGYTVLDIQQDGP-TIRYLIQK--
General information:
TITO was launched using:
RESULT:
Template:
1JE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25194 for 478 contacts (-52.7/contact) +
2D Compatibility (PS) -7453 + (NN) -3430 + (LL) 920
1D Compatibility (HY) -800 + (ID) 400
Total energy: -36357.0 ( -76.06 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1JE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JE3-query.scw
PDB file :
Tito_Scwrl_1JE3.pdb
: