Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWVEDNPNDGSKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSLEIQRLQLEIGGLRGVKFAKLTKASSFEYNE
3QSI Chain:B ((4-84))
---------------------------------------------------------------KIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSF----
General information:
TITO was launched using:
RESULT:
Template:
3QSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48976 for 554 contacts (-88.4/contact) +
2D Compatibility (PS) -8945 + (NN) -2722 + (LL) 3300
1D Compatibility (HY) -12400 + (ID) 4000
Total energy: -73743.0 ( -133.11 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_3QSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QSI-query.scw
PDB file :
Tito_Scwrl_3QSI.pdb
: