Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPV-PCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLS--RGFLGSGVFTSVQKAYREVYRKDFDFSL
1EMJ Chain:A ((7-220))-----------SWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGP---NQ-----AHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE


General information:
TITO was launched using:
RESULT:

Template: 1EMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129817 for 1716 contacts (-75.7/contact) +
2D Compatibility (PS) -22486 + (NN) -9159 + (LL) 1608
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -179104.0 ( -104.37 by residue)
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_1EMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EMJ-query.scw
PDB file : Tito_Scwrl_1EMJ.pdb: