Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAGIIGLGLMGGSLGLALQEWGRFKSVIGYDHNALHAKLALTLGLVDECVEFEKIL-----ECDVIFLAIPVEGIIECLKKMTPIKKSATIIDLGGAKAQILHNI-PKSIRQNFIAAHPMCGTEFYGPKASVKGLYENALVI-----LCDLEDSGTEQVEIAKEIF---LGIKARLIKMKSNEHDTHVAYISHLPHVLSYALANSVLKQNDPEMILSLAGGGFRDMSRLSKSSPLMWKDIFKQNRDNVLEAIEKCEKEIAQAKAWIENNDYESLAEWMAQANKLQEFM |
| 3KTD Chain:A ((33-259)) | --------------------------SVFGYNRSRSGAKSAVDEGF-DVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMAGTA-SGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLA--IVGDNGGALSLSLAAGSYRDSTRVAGTDPGLVRAMCESNAGPLVKALDEALAILHEAREGLTAEQPNIEQLADNGYRSRIRYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62813 for 1463 contacts (-42.9/contact) +
2D Compatibility (PS) -22666 + (NN) -7398 + (LL) 1716
1D Compatibility (HY) -16000 + (ID) 3000
Total energy: -110161.0 ( -75.30 by residue)
QMean score : 0.312
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