Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQNAEEKQSLGIKTPQEEIITPKPPKKTPKEESHNGDKLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYSIHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLR------KAF-PNKYVSIKTNLNDEKYIVINDFNNE
2CPM Chain:A ((46-121))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEFRKRMEKEVSDFIQDSGQIKKKFQ--PMNKIERSILHDVVEVAGLTSFSFGEDDDCRYVMIFKKEFAPSDEELDSYRRG


General information:
TITO was launched using:
RESULT:

Template: 2CPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3225 for 366 contacts (-8.8/contact) +
2D Compatibility (PS) -7308 + (NN) -2242 + (LL) 13428
1D Compatibility (HY) 800 + (ID) 400
Total energy: 1053.0 ( 2.88 by residue)
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_2CPM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CPM-query.scw
PDB file : Tito_Scwrl_2CPM.pdb: