Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLSALLAFSCAHALSDMDLIKKAKESQLEPMPMGKALKEYQIKKTRDVGIGAKNSEIMTSAQVELGKMLYFDPRISTSYLVSCNTCHNLGLGGVDLIPSAIGSQWKKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKVVVEKINSIPGYVKLFRKAY-GSKVKIDFKLIADSIAMFEATLITP-SRYDDFLRGNPKALSKAEKEGLDLFISKGCVACHNGINLGG-TMQPFGVV-KPYKFANVGDFKGDKNG----LVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIEISDAEAKKIETFFEALKGKKPKIIYPELPVMTDKTPKPSF |
| 1RZ5 Chain:A ((26-321)) | --------------------------------------------------------------LTQAKVELGKMEFFEPRLSSSHLISCNTCHNVGLGGDDELPTSIGHGWQKGPR--NSPTVFNAVFNAAQFWDGR-------AKGPVQAGVEMSSTPDRVVATLKSMPEYIERFEDAFPGQENPVTFDNMAVAIEAYEATLITPEAPFDKYLRGDTSALNESEKEGLALFMDRGCTACHSGVNLGGQNYYPFGLVAK------KGRFSVTETASDEYVFRASPLRNIELTAPYFHSGAVWSLEEAVAVMGTAQLGTELNNDEVKSIVAFLKTLTGNVPEVTYPVLPPSTANTPKPVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RZ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74993 for 2163 contacts (-34.7/contact) +
2D Compatibility (PS) -29107 + (NN) -13460 + (LL) 6212
1D Compatibility (HY) -23200 + (ID) 6750
Total energy: -141298.0 ( -65.33 by residue)
QMean score : 0.459
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