Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDRKLLLQDFDKVALSLKKRNHAMDDELERLREAIAHYKKQLIELEGLQAFQNKVSKEFGIKMAQKMDTSDLKKELENNKIKLNELSKSVGEAEQEMDLKLSI----IPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGV-KLAKSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHP--KESDAMQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQ-KNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
1SET Chain:A ((76-412))-----------------------------------------------------------------------------------LGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVGG-EEANREIKRVGGPPEFSFPPLDHVALMEKNGW--WEPRISQVSGSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM


General information:
TITO was launched using:
RESULT:

Template: 1SET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109342 for 2649 contacts (-41.3/contact) +
2D Compatibility (PS) -35846 + (NN) -14706 + (LL) 7388
1D Compatibility (HY) -21200 + (ID) 6550
Total energy: -180256.0 ( -68.05 by residue)
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_1SET.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SET-query.scw
PDB file : Tito_Scwrl_1SET.pdb: