Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEPKYAIIINDIKRLISDGTFKPGEKIYSEDELKKKYNVSNTTVVRALHELVRAGILARYQGKGTYVSKSIINEEVIFNEYTTVPNGRFNRKTKITNEHTKVVAINEIQDAR-----IAKKLQIPPENMIVHFQRIRLIDDLPWTVQNNYMAKSNLINVDLTNFEKFNSLSEVIKELYGINI------LHEAMKERIEVEFPVKDKNNFKLLEIDTELPLYHIERITYVPEGQPYEYIESYLRHNFYSIEIEKKKQ |
3BWG Chain:A ((8-218)) | ------QQIATEIETYIEEHQLQQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYI-----SLLSNQG------DFNVTSKVIEL----DVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKS--IVTYLNNEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEY----------LGLEAGLPKLYIESIFHLTNGQPFDY------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71718 for 1240 contacts (-57.8/contact) +
2D Compatibility (PS) -20723 + (NN) -7154 + (LL) 3752
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -110943.0 ( -89.47 by residue)
QMean score : 0.414
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