Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLAIWQIILLVILAACT-ILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVLGVGTYGGASI-PDFTTGAIVGTVFAVLSGQDAEFAIGLAIPVGLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED |
1J4N Chain:A ((11-94)) | -----WRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56892 for 448 contacts (-127.0/contact) +
2D Compatibility (PS) -8533 + (NN) -1310 + (LL) 14924
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -58761.0 ( -131.16 by residue)
QMean score : -0.055
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