Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKT-----------EQMG---------YNY---QLLHLVGKDSELQQSHFRKTFFENRVLISGE-QLNEFVW-------RGGEVIGGNIRCFLKLAGTNFMPDFT-NKIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEI--GHSVDAKPCLIGAKVNVSRETLTNF |
| 4MJX Chain:A ((61-328)) | ------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPMITMPIGVQVKMDATNKTI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82447 for 1744 contacts (-47.3/contact) +
2D Compatibility (PS) -24661 + (NN) -3081 + (LL) 4652
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -123737.0 ( -70.95 by residue)
QMean score : 0.409
|
|
|