Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKLVHPKADVIASN--GGVVAV--SGEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPPYYFTDEEDKGRVNATKLVAIKSREIFLEHA-------DQFINGIVIEEE------------------DFDKLAVLRSDL--EKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
| 3NIW Chain:A ((4-269)) | -KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYG-------IVPLANELRMNEFGGFILSYNGGEIINWES--KEMMYENVL--PNEVVPVLY--------------------ECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77489 for 1925 contacts (-40.3/contact) +
2D Compatibility (PS) -25405 + (NN) -10432 + (LL) 2140
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -132286.0 ( -68.72 by residue)
QMean score : 0.380
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