Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPTMMTYINEEEEMCRAILANFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYEKLSNHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTERLVA----LRNYESKYTPFT-YTVKFGTAGNDRTLLIPADLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA |
1MOR Chain:A ((38-357)) | -------------------LSELGPNADELLSKVEH----IQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFT-TQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRI-EALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP-HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQ-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160123 for 2709 contacts (-59.1/contact) +
2D Compatibility (PS) -33087 + (NN) -8436 + (LL) 3456
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -218190.0 ( -80.54 by residue)
QMean score : 0.442
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