Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEKKKKFRLFDAVLMAVCVVL---VVESAAPAAAIGSSQFFWWIALLILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRK--WGARVAWLYWINYPIWMASLAVLFVEVITQIFPVSFGTPVSIL-IQLIFVWIVVIVSCYPVSDSKWILNIAAFCKVAIMLCLGVLGIYFAITKGLANDFSGKALLPTFDLESLSFISVILF-NFLGFEVVTTLASDMENPKKQIPQAIIYGGILIAFFYLLAAFGMGAAIPTSEL--STSGGLIDSFIMLIGGVNPFVIIIGIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNDMPTGTSILNGIVASVLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKLDPDRERPFKVPGGKILLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTIVAVIVGEICIWLAGKRKDKGEIKNEND |
3GI8 Chain:C ((4-314)) | --KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGA-LSILLWMSYVISIA----LFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLF--IFAGLITIHPSYVIPDLAPS-AVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYG-GAN-VAYSLAKDGELPEFFER--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -331100 for 2524 contacts (-131.2/contact) +
2D Compatibility (PS) -31572 + (NN) -10921 + (LL) 12300
1D Compatibility (HY) -26000 + (ID) 4050
Total energy: -391343.0 ( -155.05 by residue)
QMean score : 0.307
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