Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVS--EQAG-DVTSWKI-ERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD |
| 3U1W Chain:A ((9-128)) | ------------------------------------------------------------PLPPVENAFQEKYPDAKNPVFEIE--GN--YYVVDFNNGGSETTAWFTD-QGIWMMEKIDISF-------------------AQLPAAVSTAFKQSFYSNWTVDDTYAINRLNMGIVYKIEAEQSNSEVDLYYSQY-GNLIKAVD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14405 for 768 contacts (18.8/contact) +
2D Compatibility (PS) -12030 + (NN) 2316 + (LL) 3076
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 3517.0 ( 4.58 by residue)
QMean score : 0.361
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