Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFVKMQEKNENK
3QAY Chain:A ((30-49))
---YNKSLAPVLADTFRKEGHKV------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 175 for 78 contacts (2.2/contact) +
2D Compatibility (PS) -1976 + (NN) 239 + (LL) 2156
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -1706.0 ( -21.87 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_3QAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QAY-query.scw
PDB file :
Tito_Scwrl_3QAY.pdb
: