Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEWEGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF
4J42 Chain:A ((8-87))
-----KITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQFIPILEGISTDLKRIADKFR------------
General information:
TITO was launched using:
RESULT:
Template:
4J42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15483 for 365 contacts (-42.4/contact) +
2D Compatibility (PS) -8552 + (NN) 45 + (LL) 924
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -27916.0 ( -76.48 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_4J42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J42-query.scw
PDB file :
Tito_Scwrl_4J42.pdb
: