Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDR-EYLKQNPIVEMI-GYGTYNQPKGTWSDDSSLTFALMESLISG--YDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFY-LGKDFSFGKKNKITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 3O5T Chain:A ((6-290)) | ----------------IRSRALGAYLGLACGDALGATVEFLTKGEIAHQYGVHKHIKGGGWLKLPAGQVTDDTEMSIHLGRAILAAPEWDARRAAEEFAVWLK-------GVPVDVGDTTRRGIRRFIMHGTLSEP--ESEYHAGNGAAMRNLPVALATLGDDAAF---ERWTVEQAHITHCNAMSDAATLTLGHMVRRLVLGGDVRDVRDESNKLIAKHRQ---FK--FQPYRGL--------------ATAYIVDTMQTVMHYYFQTDSVESCVVETVNQGGDADTTGAIAGMLAGATYGVETIPPRWLRKLDR--DVYNEICAQVDGLLAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202758 for 2606 contacts (-77.8/contact) +
2D Compatibility (PS) -28960 + (NN) -5601 + (LL) 2224
1D Compatibility (HY) -11600 + (ID) 4150
Total energy: -250845.0 ( -96.26 by residue)
QMean score : 0.437
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