Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLKQLTNQLFTSTIFLVTMLFIIPPTFAIADGSKVSFYEYIYGAPLRWLTVISTTEKKGAFLEMFFSENEGINIQWLNLIINFLLVFLVITIIFSLAKKFYNKKNA
1ZT2 Chain:A ((171-183))
------------------------------------------------------------------YFSGNRGFHVQVD-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZT2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1260 for 36 contacts (-35.0/contact) +
2D Compatibility (PS) -1280 + (NN) 962 + (LL) 9032
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 5604.0 ( 155.67 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_1ZT2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZT2-query.scw
PDB file :
Tito_Scwrl_1ZT2.pdb
: