Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNR---EQVIVMEKGLLVQVN--EEGKNDLYRVFIDQRIIFTT----K--GDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQRTLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA
3E97 Chain:A ((28-220))
------------------------VVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSL--RERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAA-GVPQPEVLPLGTQDIMARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAAL---
General information:
TITO was launched using:
RESULT:
Template:
3E97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110446 for 1258 contacts (-87.8/contact) +
2D Compatibility (PS) -19058 + (NN) -4366 + (LL) 2804
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -135066.0 ( -107.37 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3E97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E97-query.scw
PDB file :
Tito_Scwrl_3E97.pdb
: