Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFS--GTTYNISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
4OOI Chain:A ((26-92))
------------VVLLKAMANERRLQI-LCMLLDNELSVGELSSRLELSQSALSQHLAWLRRDGLVNTRKEAQTVFYTLS-------------------
General information:
TITO was launched using:
RESULT:
Template:
4OOI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30953 for 403 contacts (-76.8/contact) +
2D Compatibility (PS) -6652 + (NN) -1143 + (LL) 2464
1D Compatibility (HY) -8400 + (ID) 1000
Total energy: -45684.0 ( -113.36 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_4OOI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOI-query.scw
PDB file :
Tito_Scwrl_4OOI.pdb
: