Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPHLLRNGFLEEPQFEPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQDVAVMMDLPYEIAQFKRIKKRAVLELATLMGILVRK
2O8X Chain:A ((4-61))
------------------------------------------------------------------------EDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLA--------
General information:
TITO was launched using:
RESULT:
Template:
2O8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25534 for 379 contacts (-67.4/contact) +
2D Compatibility (PS) -6241 + (NN) -4372 + (LL) 7092
1D Compatibility (HY) 400 + (ID) 350
Total energy: -29005.0 ( -76.53 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2O8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O8X-query.scw
PDB file :
Tito_Scwrl_2O8X.pdb
: