Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMIDQEEEESQTAWKEKYRFAIHHYTNE---TDLAGV----EKIDTLIQTGFTLPEGYKLIAVRHYGKQNLVKENTLIHAKTSFEVSICRELKVKI |
3J7A Chain:B ((68-124)) | ---------------------------------------VNLADLNNDEDQAH--KKIKLSCDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGH-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1472 for 202 contacts (-7.3/contact) +
2D Compatibility (PS) -4958 + (NN) 689 + (LL) 7700
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -3291.0 ( -16.29 by residue)
QMean score : 0.272
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