Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLIS-----LNVAVIEKLQEDMGFLFR
1FCJ Chain:A ((246-289))
----------------------------------------------------------VVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESF---
General information:
TITO was launched using:
RESULT:
Template:
1FCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6109 for 202 contacts (-30.2/contact) +
2D Compatibility (PS) -4379 + (NN) -2504 + (LL) 5396
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -10346.0 ( -51.22 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1FCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FCJ-query.scw
PDB file :
Tito_Scwrl_1FCJ.pdb
: