Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFL--PYYVKEIDGVKVGFIGIVTTEIPNLVLANHIK-DYDFLDEAETIVKYSAELRGQGVNAIVVLSH--VPALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTG-ELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQQYLSNQTYFLQIS-GLKYTFTDTDDLDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFK--KANLVTAIDPDTETFINYIK------DQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 3IVD Chain:A ((59-501)) | --------------------------------------------------------------------------------------------------AGDYF-TGPYISSLTKGKAIIDIMNTMPFDAVTIGNHEFDHG---WDNTLLQLSQAKF-PIVQG-------------NIFYQNS---SKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGT----DVRRALDKDIQTASQV---KGLDILITGHAH------VGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTVKNFELKTIYADEWKPDQQTKQVIDG-WNKKLDEVVQQTVAQSPVELKRAYGESAS-LGNLAADA---LLAAAGKNTQLALTNSGGIRNEIPA------GAITMGGVISTFPFPNELVTMELTGKQ-LRSLMEHGASLSNGVLQVSKGLEMKYDSSKPVGQ--RVITLTL-NGKPIEDATVYHIATQSFLADGGDGFTAFTEGKARNITGGYYVYHAVVDYFKAGNTITDEQLNGMRVKDIK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65952 for 3627 contacts (-18.2/contact) +
2D Compatibility (PS) -46119 + (NN) -16297 + (LL) 13380
1D Compatibility (HY) -18800 + (ID) 6450
Total energy: -140238.0 ( -38.67 by residue)
QMean score : 0.412
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