Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK
3NHQ Chain:A ((412-454))
-------------------------------LAIRFHRQESGWIFWFRHEEVHRIRWG-GKPEKLLTIGPSGPRL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1136 for 133 contacts (8.5/contact) +
2D Compatibility (PS) -4313 + (NN) -3162 + (LL) 6400
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -2739.0 ( -20.59 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_3NHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NHQ-query.scw
PDB file :
Tito_Scwrl_3NHQ.pdb
: