Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK |
| 3GRY Chain:A ((30-248)) | ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFN---------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEM------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -155521 for 1679 contacts (-92.6/contact) +
2D Compatibility (PS) -23279 + (NN) -3586 + (LL) 4684
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -198352.0 ( -118.14 by residue)
QMean score : 0.489
|
|
|