Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
2ZDH Chain:A ((219-260))
----------------------------------------EAPFYDYETKYTPGRAELLIPAPLDPGTQETVQELALKAYKV--------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZDH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2754 for 161 contacts (17.1/contact) +
2D Compatibility (PS) -4469 + (NN) -2501 + (LL) 4216
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -3150.0 ( -19.57 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_2ZDH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZDH-query.scw
PDB file :
Tito_Scwrl_2ZDH.pdb
: