Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKE-IECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
1RBL Chain:M ((56-92))
------------------------------MWKLPLFACAAPQQVLDEVRECRSEYGDCYIRVAGFD-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 433 for 144 contacts (3.0/contact) +
2D Compatibility (PS) -3832 + (NN) -1558 + (LL) 7024
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -983.0 ( -6.83 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1RBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RBL-query.scw
PDB file :
Tito_Scwrl_1RBL.pdb
: