Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIAKFFRNVSSEMHKVTWPTRKELLTYT-----VTVVITVVLFALFFMLIDFGIEQIIKLIV
3J45 Chain:E ((4-43))
---------EARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILV------------
General information:
TITO was launched using:
RESULT:
Template:
3J45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6071 for 112 contacts (-54.2/contact) +
2D Compatibility (PS) -3331 + (NN) -828 + (LL) 2472
1D Compatibility (HY) 0 + (ID) 50
Total energy: -7808.0 ( -69.71 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3J45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J45-query.scw
PDB file :
Tito_Scwrl_3J45.pdb
: