Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEKKILVVDDEKPIADIVKFNLNKEGFDVYCAYDGDEALELVEEVQPDLILLDIMLPGRDGIEVCREVRKKYDMPIIMVTAKDSEIDKVIGLELGADDYVTKPFSNRELIARVKANLRRHSQVSSSTAEEEENSELEIGSLIIHPDAYVASKRGETIELTHREFELLHYLAKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPAWLVTRRGVGYYLRNPEQE
1NXS Chain:A ((2-119))
---KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILD--LPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS--------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82054 for 906 contacts (-90.6/contact) +
2D Compatibility (PS) -12829 + (NN) -7953 + (LL) 9312
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -110724.0 ( -122.21 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_1NXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXS-query.scw
PDB file :
Tito_Scwrl_1NXS.pdb
: