Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAI-TAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILG-EKITTKAEIERAAKKIYDMGVKAVVIKGGHS-EMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAY-RMEDGK |
4C5M Chain:A ((5-267)) | ----KVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLET-ALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCK---EVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128222 for 2320 contacts (-55.3/contact) +
2D Compatibility (PS) -28464 + (NN) -9103 + (LL) -20
1D Compatibility (HY) -15600 + (ID) 5200
Total energy: -186609.0 ( -80.43 by residue)
QMean score : 0.503
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