Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAELAVYFIAGTQDIVRGTLPSVLEEALKGGITCFQYREKGAGSLQTASERKEMALECQKLCAKYQVPFIINDDVALALEIGADGIHVGQTDEAIRQVIASCSGKMKIGLSVHSVSEAKEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGITIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKNPGSPS
1G6C Chain:A ((14-217))
MKELLSVYFIMGSNN-TKADPVTVVQKALKGGATLYQFREKGGDAL-TGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAI-GDMILGVAAHTMSEVKQAEEDGA-DYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFR------
General information:
TITO was launched using:
RESULT:
Template:
1G6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132936 for 1747 contacts (-76.1/contact) +
2D Compatibility (PS) -22768 + (NN) -15456 + (LL) -100
1D Compatibility (HY) -15200 + (ID) 5000
Total energy: -191460.0 ( -109.59 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_1G6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6C-query.scw
PDB file :
Tito_Scwrl_1G6C.pdb
: