Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGYYSSSEETILLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGLQVFTI-HGILFLIAGILTITKKEYKTNSKEDEGTKWE
2K5R Chain:A ((1-97))
MDRKL---------------------------LHLLCSPDTRQPLSLLESKGLEALNKAIVS---------------GTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEEAIATIQIANFPDKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2K5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39715 for 586 contacts (-67.8/contact) +
2D Compatibility (PS) -10213 + (NN) -1192 + (LL) 4232
1D Compatibility (HY) 800 + (ID) 1000
Total energy: -47088.0 ( -80.35 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_2K5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5R-query.scw
PDB file :
Tito_Scwrl_2K5R.pdb
: